Alignment issues,

In addition to having the presets not function after the most recent update, I frequently have sessions that, while window-aligned, assign commands to the wrong channel.  I will often have to switch windows repeatedly and bank both ways (after replacing my bank buttons) to get a mute button to mute the track it's on.  Until I toggle from mix-edit and scroll to both ends of the mixer the track titles and the corresponding controls are not the same.  Sometimes it's a few channels off, sometimes it isn't even on the page.  Pro Tools 12.4 is set to fill channels when banking.  It often works fine, but does this routinely.  The nav pad is also on the wrong side of usable; scrolling is unpredictable and unreliable, as is zooming.  (sometimes will do nothing, sometimes leap through a whole session, or max/min zoom).    I was just going hide it, once I can get it to save a layout, unless it can work.  Any known fixes for these?  

Thanks,

Jordan 

Mac Pro 5,1 Hex, 32GB, PTHD 12.4.